Jennifer Babik, MD

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(415) 206-8137

505 Parnassus Avenue
San Francisco, CA 94117

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  • Associate Professor, School of Medicine

Biography

Jennifer Babik specializes in clinical infectious diseases with a particular focus on infections in immunocompromised hosts. She attends on the Immunocompromised Host and General Infectious Diseases Consult Services, the Internal Medicine teaching wards, and has clinic in the Infectious Diseases Practice at UCSF Medical Center.

Displaying 1 - 52 of 52

  1. Huppert LA, Hsu G, Elnachef N, Flint L, Frank JA, Gensler LS, Hsiao EC, Khanna RR, Qasim A, Schwartz BS, Widera E, Zapata C, Babik JM. A single center evaluation of applicant experiences in virtual interviews across eight internal medicine subspecialty fellowship programs. Med Educ Online. 2021 Dec; 26(1):1946237. View on Pubmed
  2. Consunji MV, Kohlwes RJ, Babik JM. Evaluation of a longitudinal subspecialty clinic for internal medicine residents. Med Educ Online. 2021 Dec; 26(1):1955429. View on Pubmed
  3. Saxena K, Dhaliwal G, Rao MN, Babik JM. A Short-Lived Crisis. J Hosp Med. 2021 Oct; 16(10):623-627. View on Pubmed
  4. Penner JC, Dyster TG, Babik JM. The Reverse Halo Sign in an Immunocompromised Host. J Gen Intern Med. 2021 08; 36(8):2452-2453. View on Pubmed
  5. Iverson N, Subbaraj L, Babik JM, Brondfield S. Correction to: Evaluating an Oncology Video Curriculum Designed to Promote Asynchronous Subspecialty Learning for Internal Medicine Residents. J Cancer Educ. 2021 Apr; 36(2):430. View on Pubmed
  6. Huppert LA, Santhosh L, Babik JM. Trends in US Internal Medicine Residency and Fellowship Applications During the COVID-19 Pandemic vs Previous Years. JAMA Netw Open. 2021 04 01; 4(4):e218199. View on Pubmed
  7. Bond AR, Bainbridge E, Doernberg SB, Babik JM, Miller S, Khanafshar E, Henry T, David A, Russell M, Brandman D, Sherman CB, Yao F, Fung M. Disseminated Legionella micdadei infection in a liver transplant patient presenting as pulmonary nodules and a laryngeal lesion. Transpl Infect Dis. 2021 Jun; 23(3):e13563. View on Pubmed
  8. Iverson N, Subbaraj L, Babik JM, Brondfield S. Evaluating an Oncology Video Curriculum Designed to Promote Asynchronous Subspecialty Learning for Internal Medicine Residents. J Cancer Educ. 2021 04; 36(2):422-429. View on Pubmed
  9. Fung M, Babik JM. COVID-19 in Immunocompromised Hosts: What We Know So Far. Clin Infect Dis. 2021 01 27; 72(2):340-350. View on Pubmed
  10. Kyla Sherwood, Jennifer M Babik. 1118. Development of a Curriculum for Internal Medicine Residents on Latent and Active Pulmonary TB: A Targeted Needs Assessment. Open Forum Infectious Diseases. 2020 Dec 31; 7(Supplement_1):s589-s590. View on Pubmed
  11. Fung M, Otani I, Pham M, Babik J. Zoonotic coronavirus epidemics: Severe acute respiratory syndrome, Middle East respiratory syndrome, and coronavirus disease 2019. Ann Allergy Asthma Immunol. 2021 Apr; 126(4):321-337. View on Pubmed
  12. Huppert LA, Hsiao EC, Cho KC, Marquez C, Chaudhry RI, Frank J, Goglin SE, Hsu G, Kathpalia P, Khanna R, Kompala T, Rao MN, Bower BA, Trafas V, Santhosh L, Schwartz BS, Babik JM. Virtual Interviews at Graduate Medical Education Training Programs: Determining Evidence-Based Best Practices. Acad Med. 2020 Dec 08. View on Pubmed
  13. Fung M, Nambiar A, Pandey S, Aldrich JM, Teraoka J, Freise C, Roberts J, Chandran S, Hays SR, Bainbridge E, DeVoe C, Roque Gardner A, Yokoe D, Henrich TJ, Babik JM, Chin-Hong P. Treatment of immunocompromised COVID-19 patients with convalescent plasma. Transpl Infect Dis. 2021 Apr; 23(2):e13477. View on Pubmed
  14. Mick E, Kamm J, Pisco AO, Ratnasiri K, Babik JM, Castañeda G, DeRisi JL, Detweiler AM, Hao SL, Kangelaris KN, Kumar GR, Li LM, Mann SA, Neff N, Prasad PA, Serpa PH, Shah SJ, Spottiswoode N, Tan M, Calfee CS, Christenson SA, Kistler A, Langelier C. Upper airway gene expression reveals suppressed immune responses to SARS-CoV-2 compared with other respiratory viruses. Nat Commun. 2020 11 17; 11(1):5854. View on Pubmed
  15. Huppert LA, Babik JM. Best Practices to Successfully Navigate a Virtual Interview: a Five-Step Guide for Hematology/Oncology Fellowship Applicants. J Cancer Educ. 2020 10; 35(5):860-861. View on Pubmed
  16. Kerkhoff AD, Rutishauser RL, Miller S, Babik JM. Clinical Utility of Universal Broad-Range Polymerase Chain Reaction Amplicon Sequencing for Pathogen Identification: A Retrospective Cohort Study. Clin Infect Dis. 2020 09 12; 71(6):1554-1557. View on Pubmed
  17. Shah SJ, Barish PN, Prasad PA, Kistler A, Neff N, Kamm J, Li LM, Chiu CY, Babik JM, Fang MC, Abe-Jones Y, Alipanah N, Alvarez FN, Botvinnik OB, Castaneda G, CZB CLIAhub Consortium , Dadasovich RM, Davis J, Deng X, DeRisi JL, Detweiler AM, Federman S, Haliburton J, Hao S, Kerkhoff AD, Kumar GR, Malcolm KB, Mann SA, Martinez S, Mary RK, Mick E, Mwakibete L, Najafi N, Peluso MJ, Phelps M, Pisco AO, Ratnasiri K, Rubio LA, Sellas A, Sherwood KD, Sheu J, Spottiswoode N, Tan M, Yu G, Kangelaris KN, Langelier C. Clinical features, diagnostics, and outcomes of patients presenting with acute respiratory illness: A retrospective cohort study of patients with and without COVID-19. EClinicalMedicine. 2020 Oct; 27:100518. View on Pubmed
  18. Adler E, Hobbs A, Dhaliwal G, Babik JM. Gender Differences in Authorship of Clinical Problem-Solving Articles. J Hosp Med. 2020 08; 15(8):475-478. View on Pubmed
  19. Fung M, Chiu CY, DeVoe C, Doernberg SB, Schwartz BS, Langelier C, Henrich TJ, Yokoe D, Davis J, Hays SR, Chandran S, Kukreja J, Ng D, Prostko J, Taylor R, Reyes K, Bainbridge E, Bond A, Chin-Hong P, Babik JM. Clinical outcomes and serologic response in solid organ transplant recipients with COVID-19: A case series from the United States. Am J Transplant. 2020 11; 20(11):3225-3233. View on Pubmed
  20. Santhosh L, Babik JM. Diversity of the Infectious Diseases Trainee Pipeline: The Future Looks Bright, but We Must Not Be Complacent. J Infect Dis. 2020 07 06; 222(3):511-513. View on Pubmed
  21. Block BL, Anderson D, O'Brien B, Babik J. Getting Neighborly in 2030: A Shared Fellow Workspace Improves Communication, Teaching, and Burnout. J Grad Med Educ. 2020 Jun; 12(3):358-360. View on Pubmed
  22. Mick E, Kamm J, Pisco AO, Ratnasiri K, Babik JM, Calfee CS, Castañeda G, DeRisi JL, Detweiler AM, Hao S, Kangelaris KN, Kumar GR, Li LM, Mann SA, Neff N, Prasad PA, Serpa PH, Shah SJ, Spottiswoode N, Tan M, Christenson SA, Kistler A, Langelier C. Upper airway gene expression differentiates COVID-19 from other acute respiratory illnesses and reveals suppression of innate immune responses by SARS-CoV-2. medRxiv. 2020 May 19. View on Pubmed
  23. Budak JZ, Brickman CE, Abdoler EA, Wallender EK, Mulliken JS, Kerkhoff AD, Lampiris H, Babik JM, Koss CA, Schwartz BS. Response to: Is Burnout Infectious? Understanding Drivers of Burnout and Job Satisfaction Among Academic Infectious Diseases Physicians. Open Forum Infect Dis. 2020 Apr; 7(4):ofaa098. View on Pubmed
  24. Pillsbury MM, Rubio LA, Lucas CG, Babik JM. Coccidioidomycosis Presenting with Fever and Back Pain. J Gen Intern Med. 2020 06; 35(6):1887-1888. View on Pubmed
  25. Santhosh L, Babik JM. Diversity in the Pulmonary and Critical Care Medicine Pipeline. Trends in Gender, Race, and Ethnicity among Applicants and Fellows. ATS Sch. 2020 Mar 05; 1(2):152-160. View on Pubmed
  26. Santhosh L, Babik JM. Trends in Racial and Ethnic Diversity in Internal Medicine Subspecialty Fellowships From 2006 to 2018. JAMA Netw Open. 2020 02 05; 3(2):e1920482. View on Pubmed
  27. Babik JM, Luther VP. Creating and Presenting an Effective Lecture. J Contin Educ Health Prof. 2020; 40(1):36-41. View on Pubmed
  28. Fung M, Babik J, Humphreys IM, Davis GE. Diagnosis and Treatment of Acute Invasive Fungal Sinusitis in Cancer and Transplant Patients. Curr Infect Dis Rep. 2019 Nov 26; 21(12):53. View on Pubmed
  29. Andrew D Kerkhoff, Michelle Matzko, Charles Chiu, Steve Miller, Jennifer M Babik. 236. The Comparative Utility Of Metagenomic Next-Generation Sequencing and Universal PCR for Pathogen Detection on Cerebrospinal Fluid: A Retrospective Analysis From a Tertiary Care Center. Open Forum Infectious Diseases. 2019 Oct 23; 6(Suppl 2):s134-s135. View on Pubmed
  30. Jehan Budak, Cristina Brickman, Emily Abdoler, Erika Wallender, Jennifer S Mulliken, Andrew D Kerkhoff, Harry Lampiris, Jennifer M Babik, Catherine Koss, Brian Schwartz, Brian Schwartz. 2534. Development of an Infectious Diseases Fellowship Well-Being Program. Open Forum Infectious Diseases. 2019 Oct 23; 6(Suppl 2):s881-s881. View on Pubmed
  31. Saeed L, Weber RJ, Puryear SB, Bahrani E, Peluso MJ, Babik JM, Haemel A, Coates SJ. Disseminated Cutaneous and Osteoarticular Sporotrichosis Mimicking Pyoderma Gangrenosum. Open Forum Infect Dis. 2019 Oct; 6(10):ofz395. View on Pubmed
  32. Sam Brondfield, Nicholas Iverson, Lakshmi Subbaraj, Jennifer Babik. Feasibility of implementing a resident oncology video curriculum. Journal of Clinical Oncology. 2019 May 20; 37(15_suppl):10500-10500. View on Pubmed
  33. Santhosh L, Abdoler E, Babik JM. Strategies to build a clinician-educator career. Clin Teach. 2020 04; 17(2):126-130. View on Pubmed
  34. Sanchez IM, Lowenstein S, Johnson KA, Babik J, Haag C, Keller JJ, Ortega-Loayza AG, Cohen J, McCalmont TH, Demer AM, Mansh MD, Hylwa SA, Liu J, Shinkai K. Clinical Features of Neutrophilic Dermatosis Variants Resembling Necrotizing Fasciitis. JAMA Dermatol. 2019 01 01; 155(1):79-84. View on Pubmed
  35. Lekshmi Santhosh, Jennifer Babik. 1322. Impact of Hospital Medicine on Trends in Infectious Diseases and Other Subspecialty Fellowship Applications. Open Forum Infectious Diseases. 2018 Nov 26; 5(suppl_1):s404-s404. View on Pubmed
  36. Catherine DeVoe, Monica Fung, Brian Schwartz, Sarah B Doernberg, Mimi Lo, Larissa Graff, Marisela Tan, Aaron Logan, Jennifer Babik, Peter Chin-Hong. 415. Breakthrough Invasive Fungal Infections in Adult Hematologic Malignancy Patients Receiving Isavuconazole Prophylaxis. Open Forum Infectious Diseases. 2018 Nov 26; 5(suppl_1):s158-s159. View on Pubmed
  37. Spottiswoode N, Peluso MJ, Deuse T, Babik JM. Nontyphoidal Salmonella as a Cause of Mediastinal Abscess after Aortic Valve Replacement: A Case Report and Review of Postoperative Salmonella Infections. Case Rep Infect Dis. 2018; 2018:6758672. View on Pubmed
  38. Fung M, Schwartz BS, Doernberg SB, Langelier C, Lo M, Graff L, Tan M, Logan AC, Chin-Hong P, Babik JM. Breakthrough Invasive Fungal Infections on Isavuconazole Prophylaxis and Treatment: What Is Happening in the Real-World Setting? Clin Infect Dis. 2018 09 14; 67(7):1142-1143. View on Pubmed
  39. Santhosh L, Babik J, Looney MR, Hollander H. Whither the Pulmonary Ward Attending? Preserving Subspecialty Exposure in United States Internal Medicine Residency Training. Ann Am Thorac Soc. 2017 Apr; 14(4):565-568. View on Pubmed
  40. Brondfield MN, Reid MJ, Rutishauser RL, Cope JR, Tang J, Ritter JM, Matanock A, Ali I, Doernberg SB, Hilts-Horeczko A, DeMarco T, Klein L, Babik JM. Disseminated Acanthamoeba infection in a heart transplant recipient treated successfully with a miltefosine-containing regimen: Case report and review of the literature. Transpl Infect Dis. 2017 Apr; 19(2). View on Pubmed
  41. Sircar AD, Abanyie F, Blumberg D, Chin-Hong P, Coulter KS, Cunningham D, Huskins WC, Langelier C, Reid M, Scott BJ, Shirley DA, Babik JM, Belova A, Sapp SG, McAuliffe I, Rivera HN, Yabsley MJ, Montgomery SP. Raccoon Roundworm Infection Associated with Central Nervous System Disease and Ocular Disease - Six States, 2013-2015. MMWR Morb Mortal Wkly Rep. 2016 Sep 09; 65(35):930-3. View on Pubmed
  42. Langelier C, Reid MJ, Halabi C, Witek N, LaRiviere A, Shah M, Wilson MR, Chin-Hong P, Douglas V, Kazacos KR, Babik JM. Baylisascaris procyonis-Associated Meningoencephalitis in a Previously Healthy Adult, California, USA. Emerg Infect Dis. 2016 08; 22(8):1480-4. View on Pubmed
  43. Uesaka T, Young HM, Pachnis V, Enomoto H. Development of the intrinsic and extrinsic innervation of the gut. Dev Biol. 2016 09 15; 417(2):158-67. View on Pubmed
  44. Su PY, Miller S, Rutishauser RL, Babik J. Broad-range PCR for early diagnosis of nosocomial Enterococcus gallinarum meningitis. Infect Dis (Lond). 2016 Aug; 48(8):640-2. View on Pubmed
  45. Babik JM, Katrak S, Miller S, Shah M, Chin-Hong P. Epstein-Barr virus encephalitis in a renal transplant recipient manifesting as hemorrhagic, ring-enhancing mass lesions. Transpl Infect Dis. 2015 Oct; 17(5):744-50. View on Pubmed
  46. Babik JM, Chin-Hong P. Transplant tourism: understanding the risks. Curr Infect Dis Rep. 2015 Apr; 17(4):473. View on Pubmed
  47. Babik JM, Cohan D, Monto A, Hartigan-O'Connor DJ, McCune JM. The human fetal immune response to hepatitis C virus exposure in utero. J Infect Dis. 2011 Jan 15; 203(2):196-206.
  48. Babik JM, Holodniy M. Impact of highly active antiretroviral therapy and immunologic status on hepatitis C virus quasispecies diversity in human immunodeficiency virus/hepatitis C virus-coinfected patients. J Virol. 2003 Feb; 77(3):1940-50.
  49. Tone M, Tone Y, Babik JM, Lin CY, Waldmann H. The role of Sp1 and NF-kappa B in regulating CD40 gene expression. J Biol Chem. 2002 Mar 15; 277(11):8890-7.
  50. Babik JM, Adams E, Tone Y, Fairchild PJ, Tone M, Waldmann H. Expression of murine IL-12 is regulated by translational control of the p35 subunit. J Immunol. 1999 Apr 01; 162(7):4069-78.
  51. Tone Y, Thompson SA, Babik JM, Nolan KF, Tone M, Raven C, Waldmann H. Structure and chromosomal location of the mouse interleukin-12 p35 and p40 subunit genes. Eur J Immunol. 1996 Jun; 26(6):1222-7.
  52. Kamtekar S, Schiffer JM, Xiong H, Babik JM, Hecht MH. Protein design by binary patterning of polar and nonpolar amino acids. Science. 1993 Dec 10; 262(5140):1680-5.